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Bioinformatician - Scientific Data Manager and Research Software Engineer in Precision Oncology and Multiomics

Bioinformatician - Scientific Data Manager and Research Software Engineer in Precision Oncology and Multiomics

EMBLHeidelberg, Neckar, DE
Vor 30+ Tagen
Stellenbeschreibung

Your role

  • Establish and curate a FAIR data repository for primary and derived data from INTeRCePT collaborators, using EMBL’s world-class IT infrastructure.
  • Data import, initial QA / QC, consistency and completeness checks, documentation and metadata.
  • Create necessary conditions for dataset integration, such as identifier consistency.
  • Support researchers with finding, accessing and trouble-shooting data.
  • Perform data uploads to public repositories, in conjunction with scientific publications, under guidance by the researchers.
  • Generate interfaces for data visualization and browsing, and perform data transformations to make them suitable for machine learning / AI methods.
  • Adapt and further develop open source scientific software useful for the above tasks.
  • Engage with scientific data management and research software engineering in the broader scientific community internationally, e.g., by contributing open source tools and training material.

Apply now

Closing date : 18 September 2024

Contract duration : until 12 / 2026

Grading : 4, 5, 6 depending on experience and qualifications (monthly salary starting at €3,607 after tax but excl. pension & insurances) + benefits

Reference number : HD02682

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    • You have

  • A university degree in the natural or life sciences, and experience with biological data analysis. A PhD, and experience in scientific computing are an advantage.
  • A passion for detail, for keeping things well-organized, and for working with others.
  • Knowledge of R and Python : good in at least one, at least basic in the other.
  • You enjoy creating interactive websites using tools such as shiny and quarto.
    • Jobalert für diese Suche erstellen

    Research Research And • Heidelberg, Neckar, DE